I think the debug is if your upshift light stays on while cranking, you are not getting signal from the crank sensor.
You could have two failed sensors on your hands, I suppose, but I'd want to know for sure it isn't just a harness, or other, issue.
!f you're comfortable around a simple oscilloscope, a single-channel scope is less than $30 on eBay these days, and it can help sniff the waveform off both a crank and cam sensor. There are ways to test both on and off the car, but I prefer on the car, and yes, I know how much work that is, but since cranksensors are now unobtainium, I'd want to be sure one was dead before flushing it down the toilet.
Off the car:
Connect pin 1 to +5V (actually anything from 5V to 20V would be fine)
Connect pin 2 to 0V
Connect a 50K resistor from +V to pin 3.
Using a multimeter, measure the voltage between pin 2 and 3 while you bring a magnet close to the device.
If you see a state change (i.e. a swing from almost 0 to almost the full supply voltage), the device is -probably- working.
-=-
On the car w/scope:
Tap in at DIS for cam sensor, and at connector near cam sensor for crank sensor. DB/O wire, I believe.
Set scope for DC, black to ground, not battery.
Look for a healthy square wave while cranking and/or while running. It doesn't need to fire to see a square waveform while cranking if the sensor is good. If it has a reliable ref. voltage going in and it's ok, it will still output. Be sure it's connected to the main harness.
The computer won't output a ref. voltage if the sensor's circuit isn't complete/no load. You can verify that the computer is outputting ref. voltage to the harness at the TPS or ACT, just be sure to have them connected, key on. Use caution, do not ground the supply voltage...the computer will not appreciate it. I backprobe at the connecter but piercing probes can be used too, just be sure as always to heal the hole w/sealer, liquid electrical tape, etc.. 4.0v ~ 5.0v is good, less is not. I typically read 4.77v, as an example. See the EVTM for testing procedures.
Notes on scope set up:
Reference voltage: 5v scale
Square wave, displayed at 50 or 100 MS. Sample graph in the EVTM as I recall.